Package: poolr 1.3-0
poolr: Methods for Pooling P-Values from (Dependent) Tests
Functions for pooling/combining the results (i.e., p-values) from (dependent) hypothesis tests. Included are Fisher's method, Stouffer's method, the inverse chi-square method, the Bonferroni method, Tippett's method, and the binomial test. Each method can be adjusted based on an estimate of the effective number of tests or using empirically derived null distribution using pseudo replicates. For Fisher's, Stouffer's, and the inverse chi-square method, direct generalizations based on multivariate theory are also available (leading to Brown's method, Strube's method, and the generalized inverse chi-square method). An introduction can be found in Cinar and Viechtbauer (2022) <doi:10.18637/jss.v101.i01>.
Authors:
poolr_1.3-0.tar.gz
poolr_1.3-0.zip(r-4.7-any)poolr_1.3-0.zip(r-4.6-any)poolr_1.3-0.zip(r-4.5-any)
poolr_1.3-0.tgz(r-4.6-any)poolr_1.3-0.tgz(r-4.5-any)
poolr_1.3-0.tar.gz(r-4.7-any)poolr_1.3-0.tar.gz(r-4.6-any)
poolr_1.3-0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
poolr/json (API)
| # Install 'poolr' in R: |
| install.packages('poolr', repos = c('https://ozancinar.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ozancinar/poolr/issues
- grid2ip.geno - Results from testing the association between depressive symptoms and 23 SNPs in the GRID2IP gene
- grid2ip.ld - Results from testing the association between depressive symptoms and 23 SNPs in the GRID2IP gene
- grid2ip.p - Results from testing the association between depressive symptoms and 23 SNPs in the GRID2IP gene
- grid2ip.pheno - Results from testing the association between depressive symptoms and 23 SNPs in the GRID2IP gene
- mvnlookup - Lookup Table for the mvnconv() Function
Last updated from:0b42b9b662. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 180 | ||
| source / vignettes | OK | 145 | ||
| linux-release | OK | 166 | ||
| macos-release | OK | 236 | ||
| macos-oldrel | OK | 223 | ||
| windows-devel | OK | 199 | ||
| windows-release | OK | 200 | ||
| windows-oldrel | OK | 194 | ||
| wasm-release | OK | 75 |
Exports:binomtestbonferroniempiricalfisherinvchisqmeffmvnconvprint.poolrstouffertippett
Dependencies:mathjaxr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Methods for Pooling P-Values from (Dependent) Tests | poolr-package poolr |
| Binomial Test | binomtest |
| Bonferroni Method | bonferroni |
| Simulate Empirically-Derived Null Distributions | empirical |
| Fisher's Method | fisher |
| Results from testing the association between depressive symptoms and 23 SNPs in the GRID2IP gene | grid2ip grid2ip.geno grid2ip.ld grid2ip.p grid2ip.pheno |
| Inverse Chi-Square Method | invchisq |
| Estimate the Effective Number of Tests | meff |
| Convert Correlations Among Multivariate Normal Test Statistics to Covariances for Various Target Statistics | mvnconv |
| Lookup Table for the mvnconv() Function | mvnlookup |
| Print Method for 'poolr' Objects | print.poolr |
| Stouffer's Method | stouffer |
| Tippett's Method | tippett |